The detailed information of tRNA gene sequence


Sequence ID>WENV170979475
Genome IDMTKZ01092065
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 366
End posion on genome 455
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggcggcccac
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGCAGAGCACCGGTCTCCAAAACCGGNNNNNNNNNNNGGTTG
TTGGGGGTTCAAGTCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
actccgcgag
Secondary structure (Cloverleaf model)
>WENV170979475	Trp	CCA
                   c      GCCA actccgcgag
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     NNNNNNNNNNNGGTTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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