The detailed information of tRNA gene sequence


Sequence ID>WENV170979492
Genome IDMTKZ01092906
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 845
End posion on genome 771
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gagcaagtgT
tRNA gene sequence 
AGGCCAGTAGCTCAACTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGCGGGTTCAAGT
CCTGCCTGGCCTGTtg
Downstream region at tRNA end position 
tggagcgaag
Secondary structure (Cloverleaf model)
>WENV170979492	Trp	CCA
                   T      GTtg tggagcgaag
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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