The detailed information of tRNA gene sequence


Sequence ID>WENV170979493
Genome IDMTKZ01093041
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1877
End posion on genome 1802
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cttccctcat
tRNA gene sequence 
GGGGCTGTAGCTCATCTGGGAGAGCGTCTGACTGGCAGTCAGAAGGTAGAGAGTTCAAGT
CTCTTCAGCTCCACAA
Downstream region at tRNA end position 
cgagcgcgaa
Secondary structure (Cloverleaf model)
>WENV170979493	Ala	GGC
                   t      ACAA cgagcgcgaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T T C T C     A
      C T A        A      + | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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