The detailed information of tRNA gene sequence


Sequence ID>WENV170979509
Genome IDMTKZ01094303
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2308
End posion on genome 2384
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cataagctat
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCACCTGTATGGGGTGCAGGTGGTCGCAGGTTCAAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
ttggccatct
Secondary structure (Cloverleaf model)
>WENV170979509	Pro	GGG
                   t      ACCA ttggccatct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T + G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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