The detailed information of tRNA gene sequence


Sequence ID>WENV170979512
Genome IDMTKZ01094593
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4074
End posion on genome 3987
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggaactttaa
tRNA gene sequence 
GCCGAGGTCGCATAGCTAGGATTAGTGCGCCGGACTTGAGATCCGGTTTCCCCTAGGGAA
GCGGGAGTTCAAATCTCCCCCTCGGCGCtt
Downstream region at tRNA end position 
tttgttttgt
Secondary structure (Cloverleaf model)
>WENV170979512	Ser	TGA
                   a      GCtt tttgttttgt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    T C G A        C      | | | | |     A
  A         T A C G       G G G A G     C
  G         + | | |                 T T
  G         G T G C
    A T T A        G     TTTCCCCTAGGGAAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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