The detailed information of tRNA gene sequence


Sequence ID>WENV170979516
Genome IDMTKZ01094837
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2634
End posion on genome 2559
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgcaaccac
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGTTAGAGCAGTCGGCTCATAACCGATTGGTCGCTGGTTCAAAT
CCGGCCGGGCCCACCA
Downstream region at tRNA end position 
cattccagtc
Secondary structure (Cloverleaf model)
>WENV170979516	Met	CAT
                   c      ACCA cattccagtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | + | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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