The detailed information of tRNA gene sequence


Sequence ID>WENV170979532
Genome IDMTKZ01095365
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12355
End posion on genome 12264
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcccacacgc
tRNA gene sequence 
GGAGAGATGCCAGAGTGGTTGAATGGGGCGGTCTCGAAAACCGTTGTGGCTCGTATGGGT
CACCGTGAGTTCGAATCTCACTCTCTCCGCCT
Downstream region at tRNA end position 
cattttcttc
Secondary structure (Cloverleaf model)
>WENV170979532	Ser	CGA
                   c      GCCT cattttcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G A G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTGGCTCGTATGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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