The detailed information of tRNA gene sequence


Sequence ID>WENV170979536
Genome IDMTKZ01095633
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 954
End posion on genome 1046
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcgcctcgc
tRNA gene sequence 
GGAGAGGTGGCAGAGCTGGCTGAATGCGGCGGTCTCGAAAACCGTTGACGCTCGCAAGGG
CGTCCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tttgcaggtc
Secondary structure (Cloverleaf model)
>WENV170979536	Ser	CGA
                   c      GCCA tttgcaggtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
    T C G A        G      | | | | |     G
  G         G A C G       G G G G G     C
  G           | | |                 T T
  C         A T G C
    T G A          G     TGACGCTCGCAAGGGCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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