The detailed information of tRNA gene sequence


Sequence ID>WENV170979540
Genome IDMTKZ01095790
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 309
End posion on genome 382
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aattgaaaat
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGCAGGTTCGAAT
CCTGTCTTCTCCACag
Downstream region at tRNA end position 
ttttatcgtt
Secondary structure (Cloverleaf model)
>WENV170979540	Ala	TGC
                   t      ACag ttttatcgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T   T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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