The detailed information of tRNA gene sequence


Sequence ID>WENV170979548
Genome IDMTKZ01095977
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1098
End posion on genome 1005
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttcaattaa
tRNA gene sequence 
GGAGAGGTACCGAAGTGGCCATAACGGGGCCGACTCGAAATCGGCTGTCCCGCTAATACC
GGGACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atgaattcga
Secondary structure (Cloverleaf model)
>WENV170979548	Ser	CGA
                   a      GCCA atgaattcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  C           | | |                 T T
  C         A C G G
    A T A          G     TGTCCCGCTAATACCGGGACC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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