The detailed information of tRNA gene sequence


Sequence ID>WENV170979563
Genome IDMTKZ01096483
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1472
End posion on genome 1398
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tctaaaattc
tRNA gene sequence 
GGGTTTGTAGCTCAATTGGTTAGAGCGCTCGGTTTACATCCGAAAGGTTAGAGGTTCAAG
TCCTCTCAGACCCACtt
Downstream region at tRNA end position 
tttaaattcg
Secondary structure (Cloverleaf model)
>WENV170979563	Val	TAC
                   c      ACtt tttaaattcg
                     G - C
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T A A        A      | | | | |     A
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C   A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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