The detailed information of tRNA gene sequence


Sequence ID>WENV170979567
Genome IDMTKZ01096635
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 459
End posion on genome 372
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tcctgcacgt
tRNA gene sequence 
GCCGGAGTGGTGGAACTGGTAGACGCGTCGGACTCAAAATCCGATGGACTTAAGGTCCGT
GGGGGTTCGATTCCCTTCTCCGGCACCA
Downstream region at tRNA end position 
gccttttttc
Secondary structure (Cloverleaf model)
>WENV170979567	Leu	CAA
                   t      ACCA gccttttttc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T T C C C     A
      C A A        G      + + | | |     G
    T       G G T G       G G G G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TGGACTTAAGGTCCGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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