The detailed information of tRNA gene sequence


Sequence ID>WENV170979568
Genome IDMTKZ01096709
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1194
End posion on genome 1267
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttcacctgtc
tRNA gene sequence 
GCCCCCATTGTCTAGCGGCCCAGGACGTAGCCCTCTCAAGGCTAAAACGCGGGTTCGAAT
CCCGCTGGGGGCACtt
Downstream region at tRNA end position 
tcaccgcctt
Secondary structure (Cloverleaf model)
>WENV170979568	Glu	CTC
                   c      ACtt tcaccgcctt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G C C C     A
      C G A        T      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AAAC
                    T - A
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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