The detailed information of tRNA gene sequence


Sequence ID>WENV170979584
Genome IDMTKZ01097439
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2916
End posion on genome 2828
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccttatcaaT
tRNA gene sequence 
GGAGAGGTGCCCGAGAGGCCGAAGGGGGCGGTTTGCTAAACCGTTGTACTGGTAACGGTA
CCGAGGGTTCGAATCCCTCCTTCTCCGAat
Downstream region at tRNA end position 
acgttaacga
Secondary structure (Cloverleaf model)
>WENV170979584	Ser	GCT
                   T      GAat acgttaacga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TGTACTGGTAACGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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