The detailed information of tRNA gene sequence


Sequence ID>WENV170979590
Genome IDMTKZ01097623
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 168
End posion on genome 81
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttattttact
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGAACTGCGAGGTTCC
GGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aacccgtcaa
Secondary structure (Cloverleaf model)
>WENV170979590	Ser	TGA
                   t      GCCA aacccgtcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAACTGCGAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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