The detailed information of tRNA gene sequence


Sequence ID>WENV170979607
Genome IDMTKZ01098453
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 413
End posion on genome 324
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagcaatttt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCCTAAGGTGCTTGCCTGCTAAGCAAGTGAGGGTGTTTGCCCT
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgtcgcgctc
Secondary structure (Cloverleaf model)
>WENV170979607	Ser	GCT
                   t      GCCA tgtcgcgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | +                 T T
    C       A G G T
      C T A        G     TGAGGGTGTTTGCCCTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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