The detailed information of tRNA gene sequence


Sequence ID>WENV170979616
Genome IDMTKZ01098914
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 940
End posion on genome 1013
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcgtcccc
tRNA gene sequence 
GGGCCTGTAGCTCAGCGGTTAGAGCAGCCGGCTCATAACCGGTCGGTCGCAGGTTCGAAC
CCTGCCAGGCCCACtc
Downstream region at tRNA end position 
tcgttgacca
Secondary structure (Cloverleaf model)
>WENV170979616	Met	CAT
                   c      ACtc tcgttgacca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     CGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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