The detailed information of tRNA gene sequence


Sequence ID>WENV170979617
Genome IDMTKZ01098959
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 169
End posion on genome 93
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctcacatgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGCGAGGCTCATAACCTCGAGGTCGCAGGTTCAAA
TCCTGTCCCCGCCACTA
Downstream region at tRNA end position 
gaagtagagg
Secondary structure (Cloverleaf model)
>WENV170979617	Met	CAT
                   t      ACTA gaagtagagg
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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