The detailed information of tRNA gene sequence


Sequence ID>WENV170979618
Genome IDMTKZ01098965
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1606
End posion on genome 1530
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatgtattgg
tRNA gene sequence 
TGCGGGGTGGAGCAGTACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCTCTGGTTCAAA
TCCAGACCCCGCAACCA
Downstream region at tRNA end position 
aaccgctcag
Secondary structure (Cloverleaf model)
>WENV170979618	Met	CAT
                   g      ACCA aaccgctcag
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     A G A C C     A
      T G A        G      | | | | |     A
    A       C G A G       T C T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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