The detailed information of tRNA gene sequence


Sequence ID>WENV170979620
Genome IDMTKZ01099049
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2395
End posion on genome 2318
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cacctgcagt
tRNA gene sequence 
CGGGGTGTGGCCTAGCCCGGTTAAGGCGCTTGACTGGGGGTCAAGAGATCGCTGGTTCAA
CTCCAGTCACCCCGACCA
Downstream region at tRNA end position 
ttctttattt
Secondary structure (Cloverleaf model)
>WENV170979620	Pro	GGG
                   t      ACCA ttctttattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     T G A C C     A
    C C G A        G      + | | | |     A
  C         T C C G       G C T G G     C
  G         | | | |                 T T
  G         A G G C
    T T A          G     AGATC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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