The detailed information of tRNA gene sequence


Sequence ID>WENV170979623
Genome IDMTKZ01099229
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 113
End posion on genome 189
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tataatattt
tRNA gene sequence 
GCATCTATAGCTCAGCTGGATAGAGTGCTGGACTTCGAATCCAGGCGTCGGGGGTTCGAG
TCCCTCTAGATGCGCCA
Downstream region at tRNA end position 
acaaaaaaag
Secondary structure (Cloverleaf model)
>WENV170979623	Arg	TCG
                   t      GCCA acaaaaaaag
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T - A
                     A - T          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     GCGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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