The detailed information of tRNA gene sequence


Sequence ID>WENV170979624
Genome IDMTKZ01099438
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1547
End posion on genome 1471
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actcccgcgt
tRNA gene sequence 
GGGCGTATAGCTCAGCTGGTCAGAGCAGCCGACTCATAATCGGCCGGTCGCAGGTTCGAG
TCCTGCTGCGCCCACCA
Downstream region at tRNA end position 
ttcgccgccc
Secondary structure (Cloverleaf model)
>WENV170979624	Met	CAT
                   t      ACCA ttcgccgccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T + G
                     A - T          T G
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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