The detailed information of tRNA gene sequence


Sequence ID>WENV170979626
Genome IDMTKZ01099504
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1398
End posion on genome 1485
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgtccgc
tRNA gene sequence 
GGTGGCGTGTCCGAGTGGCCTAAGGAGCACGCCTCGAAAGCGTGTGTGGGCGCAAGTCCA
CCCAGGGTTCGAATCCCTGCGCCACCGCgg
Downstream region at tRNA end position 
tcatgtcgcg
Secondary structure (Cloverleaf model)
>WENV170979626	Ser	CGA
                   c      GCgg tcatgtcgcg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       C A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGTGGGCGCAAGTCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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