The detailed information of tRNA gene sequence


Sequence ID>WENV170979647
Genome IDMTKZ01100888
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2315
End posion on genome 2226
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcgtgcccgc
tRNA gene sequence 
GGAGGGGTGGCCGAGAGGTCGAAGGCAGCGGTCTTGAAAACCGCCAGCGGGGCGACTCGC
TCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gatctgcggg
Secondary structure (Cloverleaf model)
>WENV170979647	Ser	TGA
                   c      GCCA gatctgcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CAGCGGGGCGACTCGCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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