The detailed information of tRNA gene sequence


Sequence ID>WENV170979648
Genome IDMTKZ01100914
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1587
End posion on genome 1498
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgtcggc
tRNA gene sequence 
GGTGGCGTGTCCGAGTGGCCTAAGGAGCACGCCTCGAAAGCGTGTGTGGGCGGAAGTCCA
CCCAGGGTTCGAATCCCTGCGCCACCGCCA
Downstream region at tRNA end position 
gtgatgttgt
Secondary structure (Cloverleaf model)
>WENV170979648	Ser	CGA
                   c      GCCA gtgatgttgt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       C A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGTGGGCGGAAGTCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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