The detailed information of tRNA gene sequence


Sequence ID>WENV170979650
Genome IDMTKZ01101122
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2043
End posion on genome 2117
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtggccaccc
tRNA gene sequence 
GGATGTGTAGCTCAGTTGGTTAGAGCGTTCGCTTCACACGCGAGAGGTCGGGGGTTCGAG
TCCCTCCACATCCACgc
Downstream region at tRNA end position 
attgagtgaa
Secondary structure (Cloverleaf model)
>WENV170979650	Val	CAC
                   c      ACgc attgagtgaa
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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