The detailed information of tRNA gene sequence


Sequence ID>WENV170979658
Genome IDMTKZ01101592
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 979
End posion on genome 904
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttgatacct
tRNA gene sequence 
GGGCGATTAACTCAGCGGCTAGAGTACTACTTTCACACGGTAGGAGTCAGAGGTTCAAAT
CCTCTATCGCCCACCA
Downstream region at tRNA end position 
gccttttgcc
Secondary structure (Cloverleaf model)
>WENV170979658	Val	CAC
                   t      ACCA gccttttgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      C G A        A      | | | | |     A
    G       C T C A       A G A G G     C
    G       | | | |                 T T
    C       G A G T
      T A          A     GAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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