The detailed information of tRNA gene sequence


Sequence ID>WENV170979659
Genome IDMTKZ01101625
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 879
End posion on genome 955
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atagcctcaC
tRNA gene sequence 
GGGGGCGTAGCTCAGTTGGTTAGAGCGCTGGCCTGTCACGCCAGAGGCCGCGGGTTCGAG
TCCCGTCGCTCCCGTCt
Downstream region at tRNA end position 
ccgtggttgg
Secondary structure (Cloverleaf model)
>WENV170979659	Asp	GTC
                   C      GTCt ccgtggttgg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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