The detailed information of tRNA gene sequence


Sequence ID>WENV170979660
Genome IDMTKZ01101628
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 864
End posion on genome 789
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gccagcctac
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGTAGAGTAGTGGTCTCCAAAACCATTGGTTGGGAGTTCGAGT
CTCTCCACCCGTGCTA
Downstream region at tRNA end position 
aatatctgaa
Secondary structure (Cloverleaf model)
>WENV170979660	Trp	CCA
                   c      GCTA aatatctgaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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