The detailed information of tRNA gene sequence


Sequence ID>WENV170979672
Genome IDMTKZ01101829
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8905
End posion on genome 8992
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatactttt
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTAATGCAGCGGCTTGCTAAGCCGTGACGGTTAAAAGCCGTCC
ACAGGTTCAAATCCTGTACCCTCCGCCA
Downstream region at tRNA end position 
taaataaaca
Secondary structure (Cloverleaf model)
>WENV170979672	Ser	GCT
                   t      GCCA taaataaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
        G A        G      | | | | |     A
      C     G A C G       A C A G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     GACGGTTAAAAGCCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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