The detailed information of tRNA gene sequence


Sequence ID>WENV170979682
Genome IDMTKZ01102080
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11224
End posion on genome 11138
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
atttattttc
tRNA gene sequence 
GGGCGGATGGTGGAATTGGTAGACACGCAAGCTTGAGGGGCTTGTGGCCGCAAGGCCGTG
GAGGTTCAAGTCCTCTTTCGCCCACCA
Downstream region at tRNA end position 
ttcgttcaga
Secondary structure (Cloverleaf model)
>WENV170979682	Leu	GAG
                   c      ACCA ttcgttcaga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     A - T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     A
    T       G G T G       G G A G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCCGCAAGGCCGT
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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