The detailed information of tRNA gene sequence


Sequence ID>WENV170979686
Genome IDMTKZ01102181
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 442
End posion on genome 531
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttattagata
tRNA gene sequence 
GGAGGGATGGCTGAGTGGCCGAAAGCGGCGGTCTTGAAAACCGTTGGACGTTCACGCGTC
CCGTGGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
actttcaaat
Secondary structure (Cloverleaf model)
>WENV170979686	Ser	TGA
                   a      GCCA actttcaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TGGACGTTCACGCGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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