The detailed information of tRNA gene sequence


Sequence ID>WENV170979688
Genome IDMTKZ01102289
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 424
End posion on genome 335
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttataatcc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCAGTCTCGAAAACTGTTGTAGCGGTAACGCTA
TCGAGGGTTCGAATCCCTCCTTCTCCGCAA
Downstream region at tRNA end position 
atcacatgcg
Secondary structure (Cloverleaf model)
>WENV170979688	Ser	CGA
                   c      GCAA atcacatgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGTAGCGGTAACGCTATC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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