The detailed information of tRNA gene sequence


Sequence ID>WENV170979692
Genome IDMTKZ01102670
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1176
End posion on genome 1263
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gatgccccac
tRNA gene sequence 
GGAGGATTCGCCTAGAGGCCTATGGCGCTCGCTTGGAAAGCGGGTTGGGTTCACGCCCTC
ACGAGTTCGAATCTCGTATCCTCCGCCA
Downstream region at tRNA end position 
tgcactaatc
Secondary structure (Cloverleaf model)
>WENV170979692	Ser	GGA
                   c      GCCA tgcactaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G C T C     A
      A G A        C      | | | | |     G
    G       T C C G       A C G A G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTCACGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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