The detailed information of tRNA gene sequence


Sequence ID>WENV170979698
Genome IDMTKZ01102805
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2892
End posion on genome 2980
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcagaaaatt
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGTTACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGCtc
Downstream region at tRNA end position 
ttttttctag
Secondary structure (Cloverleaf model)
>WENV170979698	Ser	GCT
                   t      GCtc ttttttctag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGTTACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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