The detailed information of tRNA gene sequence


Sequence ID>WENV170979702
Genome IDMTKZ01103051
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2021
End posion on genome 1946
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaaggcac
tRNA gene sequence 
GGGCCTATAGCTCAACTGGTAGAGCCACCGGCTCATAACCGGTAGGTCCCTGGTTCGACT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
aataaacaga
Secondary structure (Cloverleaf model)
>WENV170979702	Met	CAT
                   c      ACCA aataaacaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     G G A C C     A
      C A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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