The detailed information of tRNA gene sequence


Sequence ID>WENV170979712
Genome IDMTKZ01103594
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 477
End posion on genome 404
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtggtgatat
tRNA gene sequence 
GTCTTTATGGCGGAGTGGTCAATCGCGAGTTCTTGCAAAGAACTTTATCTACAGTTCGAA
TCTGTATAAAGAATtat
Downstream region at tRNA end position 
tattgtcctt
Secondary structure (Cloverleaf model)
>WENV170979712	Cys	GCA
                   t      Ttat tattgtcctt
                     G   A
                     T - A
                     C - G
                     T - A
                     T - A
                     T - A
                     A - T          T A
                    T     A T G T C     A
      T G A        G      | | | | |     G
    G       G G C G       T A C A G     C
    G       + | | |                 T T
    T       T C G C
      C A A        G     TTATC
                    A - T
                    G - C
                    T - A
                    T - A
                    C - G
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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