The detailed information of tRNA gene sequence


Sequence ID>WENV170979717
Genome IDMTKZ01104091
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1780
End posion on genome 1705
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
gaaacgttgc
tRNA gene sequence 
GCGCTTGTAGCTCAGGGGATAGAGCGAAAGGTTGCGGACCTTTAGGTCGGGGGTTCAAAT
CCCTCCAAGCGCGCCA
Downstream region at tRNA end position 
gttcaggtgc
Secondary structure (Cloverleaf model)
>WENV170979717	Arg	GCG
                   c      GCCA gttcaggtgc
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C T C C C     A
      G G A        A      | + | | |     A
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    A - T
                    A - T
                    A - T
                    G - C
                    G - C
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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