The detailed information of tRNA gene sequence


Sequence ID>WENV170979719
Genome IDMTKZ01104091
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1490
End posion on genome 1401
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tactcctccc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCAGTCTCGAAAACTGTTGTGGCGCTTGCGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcaaccccta
Secondary structure (Cloverleaf model)
>WENV170979719	Ser	CGA
                   c      GCCA gcaaccccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTGGCGCTTGCGTCACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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