The detailed information of tRNA gene sequence


Sequence ID>WENV170979728
Genome IDMTKZ01104836
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2473
End posion on genome 2387
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcgccgcgcc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGCCTATTGCGGCGGTCTTGAAAACCGTTGTGGGCTCGTCCCAC
CGGGGGTTCGAATCCCTCTCCCTCCGCag
Downstream region at tRNA end position 
gattgatgag
Secondary structure (Cloverleaf model)
>WENV170979728	Ser	TGA
                   c      GCag gattgatgag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    C       T T G C
      C T A        G     TGTGGGCTCGTCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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