The detailed information of tRNA gene sequence


Sequence ID>WENV170979730
Genome IDMTKZ01104891
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1057
End posion on genome 981
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taataagttc
tRNA gene sequence 
GGCTCGATGGCGAAGTGGTCTAACGCTGCAGTTTGCAAAACTGTCATTCGTGGGTTCGAA
TCCCACTCGAGCCTCAA
Downstream region at tRNA end position 
aaagaaaatc
Secondary structure (Cloverleaf model)
>WENV170979730	Cys	GCA
                   c      TCAA aaagaaaatc
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       A G C G       G T G G G     C
    G         | | |                 T T
    T       A C G C
      C T A        T     CATTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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