The detailed information of tRNA gene sequence


Sequence ID>WENV170979739
Genome IDMTKZ01105034
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 42245
End posion on genome 42169
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggcgggcgag
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGACAGAGCAGCGGTTTCCTAAACCGCAGGCCGGAGGTTCGAG
TCCTCCCGGGCGTACCC
Downstream region at tRNA end position 
gtccgcggcg
Secondary structure (Cloverleaf model)
>WENV170979739	Arg	CCT
                   g      ACCC gtccgcggcg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     AGGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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