The detailed information of tRNA gene sequence


Sequence ID>WENV170979751
Genome IDMTKZ01105563
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 367
End posion on genome 279
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acgataacac
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTCGAAGGTCCATGACTCGAAATCATGCGTACCCAAAAGGTAC
CGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tatttagagc
Secondary structure (Cloverleaf model)
>WENV170979751	Ser	CGA
                   c      GCCA tatttagagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    T       A G G T
      C G A        C     CGTACCCAAAAGGTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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