The detailed information of tRNA gene sequence


Sequence ID>WENV170979760
Genome IDMTKZ01105926
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 45711
End posion on genome 45635
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcaaggtcag
tRNA gene sequence 
CGGAGCGTGGCGCAGCATGGTAGCGCACTGGCATGGGGGGCCAGGGGTCAGCGGTTCAAA
TCCGCTCGCTCCGACCA
Downstream region at tRNA end position 
gggtcgccgg
Secondary structure (Cloverleaf model)
>WENV170979760	Pro	GGG
                   g      ACCA gggtcgccgg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C G C C     A
      C G A        G      | | | | |     A
    A       C G C G       A G C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  A       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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