The detailed information of tRNA gene sequence


Sequence ID>WENV170979762
Genome IDMTKZ01105936
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1521
End posion on genome 1445
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctgacaattt
tRNA gene sequence 
GTCCCCATAGCTCAGTCGGATAGAGCGTTTCCCTTCTAAGGAAAAGGTCGCAGGTTCGAT
TCCTGCTGGGGATACTA
Downstream region at tRNA end position 
aaagcgccca
Secondary structure (Cloverleaf model)
>WENV170979762	Arg	TCT
                   t      ACTA aaagcgccca
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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