The detailed information of tRNA gene sequence


Sequence ID>WENV170979779
Genome IDMTKZ01106493
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 662
End posion on genome 756
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttatccaagc
tRNA gene sequence 
GCCGAAGTGGTGGAACAGGCAGACGCGCCGGACTCAAAATCCGGTGGGGGCAACTCCTNN
ACTCCGTGCGGGTTCGATTCCCGCCTTCGGCACCA
Downstream region at tRNA end position 
ccaagtcaag
Secondary structure (Cloverleaf model)
>WENV170979779	Leu	CAA
                   c      ACCA ccaagtcaag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     C G C C C     A
      C A A        G      | | | | |     G
    A       G G T G       G C G G G     C
    G         | + |                 T T
    G       A C G C
      C A G        G     TGGGGGCAACTCCTNNACTCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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