The detailed information of tRNA gene sequence


Sequence ID>WENV170979785
Genome IDMTKZ01106959
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 960
End posion on genome 870
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaagatcC
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGAATGGAACAGTCTTGAAAACTGTCGTACCTTCACGGGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCC
Downstream region at tRNA end position 
cccaaaatag
Secondary structure (Cloverleaf model)
>WENV170979785	Ser	TGA
                   C      GCCC cccaaaatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        A     CGTACCTTCACGGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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