The detailed information of tRNA gene sequence


Sequence ID>WENV170979794
Genome IDMTKZ01107686
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1787
End posion on genome 1697
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatgcttcaa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAGGCACCGGTTTGCTAAACCGGCGTACGGGTTAAGGCC
TGTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
tcctcaaatc
Secondary structure (Cloverleaf model)
>WENV170979794	Ser	GCT
                   a      Gttt tcctcaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        A     CGTACGGGTTAAGGCCTGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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