The detailed information of tRNA gene sequence


Sequence ID>WENV170979795
Genome IDMTKZ01107700
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 18305
End posion on genome 18397
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tggggcggtc
tRNA gene sequence 
GGAGGGATGGTCGAGTGGCCGAAGACGACGGCTTGCTAAGCCGTTGCTGGGGTGTTGAGC
CTTAGCCGTGGGTTCGAATCCCACTCCCTCCGCag
Downstream region at tRNA end position 
cgaggcggcc
Secondary structure (Cloverleaf model)
>WENV170979795	Ser	GCT
                   c      GCag cgaggcggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | | |                 T T
    C       A G A C
      C G A        G     TGCTGGGGTGTTGAGCCTTAGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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