The detailed information of tRNA gene sequence


Sequence ID>WENV170979811
Genome IDMTKZ01108314
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1333
End posion on genome 1258
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgggtccatt
tRNA gene sequence 
GGGCGGATAGCTCAGCTGGGAGAGCGCGTCCCTCGCACGGACGAGGCCGAGGGTTCGAAT
CCCTTTCCGTCCACCA
Downstream region at tRNA end position 
gatgattgcc
Secondary structure (Cloverleaf model)
>WENV170979811	Ala	CGC
                   t      ACCA gatgattgcc
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     T T C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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